Find out pathway information about the proteins, Biology

Assignment Help:

Biopathways

1. Find out pathway information about these proteins using the Human Reactome.

O00327

O14503

O75586

O95096

P01137

P01308

P06744

P08240

P12236

P20309

P24863

P29966

P49336

P52945

Q07869

Q15648

Q16526

Q9UK39

O15055

Q9BTT4

a) Pathway Analysis - ID mapping and pathway assignment

How many proteins belong to the circadian clock pathway? Name two other pathways which these proteins are involved in?

b) Pathway Analysis - Overrepresentation analysis

List the top level pathways in order of significance?

What is the total number of proteins curated in the Diabetes pathway?

How many of the above list of proteins are present in the Diabetes pathway?

c) Describe the essential features of another Reactome tool.

2. Search for O15055 and P49336 in the IntAct database, explore the interactions for this proteins.

a) List the proteins O15055 interacts with giving details of the Interaction Detection Method and Publication for one of the proteins.

b) Using P49336, click on Graph to visualise the interactions of this protein then Open this network in Cytoscape.

Copy the IntAct graph or Cytoscape network in your answer.

Related Discussions:- Find out pathway information about the proteins

Can you explain about cardiomyopathies, Q. Can you explain about Cardiomyop...

Q. Can you explain about Cardiomyopathies? Cardiomyopathy is a primary disorder of heart muscle that may cause cardiac dysfunction and is not related to any obvious disease pr

Etiological factor of gastritis, Q. Etiological factor of gastritis? So...

Q. Etiological factor of gastritis? Some most frequently associated risk factors for gastritis include: • Faulty dietary habits like overeating and taking highly seasoned fo

Edema, Ed e m a It refers to excessive accumulation of fluid in tiss...

Ed e m a It refers to excessive accumulation of fluid in tissue spaces caused by disturbance in the fluid interchange between capillaries, tissue spaces and lymphatic vessel

Optical rotation in organice compounds, how the optical rotaion occurs in g...

how the optical rotaion occurs in glucose and ribose?

Vitamins necessity, Vitamins necessity Vitamins are essential organi...

Vitamins necessity Vitamins are essential organic substances. They are micro nutrients and required in small quantities. They do not produce any energy by themselves.

Explain leaf primordia, Explain Leaf Primordia ? In contrast to the ro...

Explain Leaf Primordia ? In contrast to the root, which produces branches from meristematic tissue called the pericycle, shoots have areas of meristematic tissues called nodes

What is the fact of molecular biology, What is the fact of Molecular Biolog...

What is the fact of Molecular Biology on which DNA fingerprint is based? DNA fingerprint, the method of individual identification using DNA, is based on the fact that the DNA o

Leptospirosis, Leptospirosis Synonyms: Weil’ disease, canicola fever...

Leptospirosis Synonyms: Weil’ disease, canicola fever, 7-day fever Leptospirosis is an important and widespread zoonosis. It was first described by Adolf Weil in 1886 when h

Skeleton, biological significant of a skeleton

biological significant of a skeleton

Plants, In school laboratory, what is usually regarded as evidence that pho...

In school laboratory, what is usually regarded as evidence that photosynthesis has occurred in a plant

Write Your Message!

Name

Email id

Message

Verfication Code

User Account

All Pages