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1. Create a subroutine that does the remote blast on the file protein.fa.
2. Pass that returned files from the blast to another subroutine that parses the output and sends it to an outfile. The returned values are the following: name, length, mismatches, and percent identity of the highest scoring hits.
3. You must demonstrate that you can set up an analysis pipeline using BioPerl, subroutines and Object Oriented Perl.
4. The file for processing is in Lecture10, protein.fa.
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Introductory course and so does not require any fancy coding. I will provide a guidance document to help you in producing the solutions.
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Synonyms It allows short names or alternative names for objects. Example : CREATE SYNONYM D30 FOR EMPD30; Now if we give command:
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