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1. Create a subroutine that does the remote blast on the file protein.fa.
2. Pass that returned files from the blast to another subroutine that parses the output and sends it to an outfile. The returned values are the following: name, length, mismatches, and percent identity of the highest scoring hits.
3. You must demonstrate that you can set up an analysis pipeline using BioPerl, subroutines and Object Oriented Perl.
4. The file for processing is in Lecture10, protein.fa.
QUESTION (a) Consider a car database consisting of car model, car make, car origin, Engine capacity, color, cost.
What is the archtetype/instance pattern? The archetype/instance pattern happens when one entity tracks occurrences of another entity. A common example is the relationship among
To eliminate duplicate rows (distinct operator) Example: SELECT DISTINCT DEPTNO FROM EMP;
What are the two main goals of parallelism? Load -balance multiple small accesses, so that the throughput of such accesses enhances. Parallelize large accesses so that the res
What is the disadvantage of a call by reference? During a call by reference damage or loss of data is not restricted to the subroutine, but will instantly lead to alters to th
Question 1 What do you mean by database management system? Question 2 Write a note on Object-Oriented Model Question 3 Explain Sequential File Organization Question
Explain nested relations? Nested relations The assumption of INF is a natural one in the bank examples we have considered. However, not all applications are best modelled
What is meant by Physical blocks? The input and output operations are completed in block units. The blocks residing on the disk are referred to as physical blocks.
Hierarchical
State The position of object at any moment is called state. An object can have many states depend upon time. After receiving some input instructions, the object can change its
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