Create a subroutine, Database Management System

Assignment Help:

1. Create a subroutine that does the remote blast on the file protein.fa.

2. Pass that returned files from the blast to another subroutine that parses the output and sends it to an outfile. The returned values are the following: name, length, mismatches, and percent identity of the highest scoring hits.

3. You must demonstrate that you can set up an analysis pipeline using BioPerl, subroutines and Object Oriented Perl.

4. The file for processing is in Lecture10, protein.fa.


Related Discussions:- Create a subroutine

Create the database in oracle using ddl, The Assessment page has a link to ...

The Assessment page has a link to download a conceptual model, and a list of data. You are to map this conceptual model, and create the database in Oracle using your own DDL.  T

Memory components of sga, Problem 1. Describe the Oracle Architecture w...

Problem 1. Describe the Oracle Architecture with a neat labeled diagram, Also explain the individual components of the Architecture. 2. Write about the following Oracle 9i o

Aggregation, Aggregation : One limitation of the E-R diagram is that they d...

Aggregation : One limitation of the E-R diagram is that they do not permit representation of relationships between relationships. In such a case the relationship along with its ent

Types of locks, Types of Locks There are two necessary types of locks: ...

Types of Locks There are two necessary types of locks: Binary lock : This locking mechanism has two states for to a data item: locked or unlocked Multiple-mode loc

What is the role of order by clause, What is the role of ORDER By Clause? ...

What is the role of ORDER By Clause? ORDER BY clause: The ORDER BY clause permits you to sort the records in your result set. The ORDER BY clause can just be used in select s

What are the objectives of object design, What are the Objectives of object...

What are the Objectives of object design After going through this unit, you could be able to: explain steps of object design; discuss algorithms that reduce costs;

Functional Dependencies, What exactly is the concept of Functional Dependen...

What exactly is the concept of Functional Dependencies? And how do we associate this concept with the logic of Super-keys, Candidate Keys, etc? Given Relation R(A,B,C,D,E) with de

Although how will the system recover, Although how will the system recover ...

Although how will the system recover The selection of REDO or UNDO for a transaction for the recovery is completed on the basis of the state of the transactions. This state is

What is rigorous two phase locking protocol, Differentiate strict two phase...

Differentiate strict two phase locking protocol and rigorous two phase locking protocol. In strict two phase locking protocol all exclusive mode locks taken by a transaction is

What is identity, What is Identity? Identity (or AutoNumber) is a colum...

What is Identity? Identity (or AutoNumber) is a column that automatically produces numeric values. A start and increment value can be set, but most DBA leave these at 1. A GUID

Write Your Message!

Captcha
Free Assignment Quote

Assured A++ Grade

Get guaranteed satisfaction & time on delivery in every assignment order you paid with us! We ensure premium quality solution document along with free turntin report!

All rights reserved! Copyrights ©2019-2020 ExpertsMind IT Educational Pvt Ltd