Create a subroutine, Database Management System

Assignment Help:

1. Create a subroutine that does the remote blast on the file protein.fa.

2. Pass that returned files from the blast to another subroutine that parses the output and sends it to an outfile. The returned values are the following: name, length, mismatches, and percent identity of the highest scoring hits.

3. You must demonstrate that you can set up an analysis pipeline using BioPerl, subroutines and Object Oriented Perl.

4. The file for processing is in Lecture10, protein.fa.


Related Discussions:- Create a subroutine

Database project- inventory database for a hardware store, Normal 0 ...

Normal 0 false false false EN-US X-NONE X-NONE MicrosoftInternetExplorer4

Express the subsequent query in sql assumes, Express the subsequent query i...

Express the subsequent query in SQL assumes which the data is stored within EMPLOYEE table with relevant fields (i) Display name, job, salary, and hire date of employee who are

What does the cardinality ratio specify, What does the cardinality ratio sp...

What does the cardinality ratio specify? Mapping cardinalities or cardinality ratios state the number of entities to which another entity can be associated. Mapping cardinaliti

How is the database organised in oracle, How is the database organised in O...

How is the database organised in Oracle? Database organized within Oracle in terms of table and table holds attributes and values. A database consists of one or more logical

What is substitutability, What is substitutability? Any method of a cla...

What is substitutability? Any method of a class-say A can equally well be adjured with any object belonging to any subclasses B of A. This characteristic leads to code reuse, a

Define join and outer join, Define Join and Outer Join and differentiate be...

Define Join and Outer Join and differentiate between them.      Ans: Join - It generates all the combinations of tuples from two relations which satisfy a join condition.  Oute

Database incident table, The Incident table, with an auto-incrementing in...

The Incident table, with an auto-incrementing incident number, etc, looks like: incident_num reporter date time incide

Creating views with check option-data control, Creating views with check op...

Creating views with check option : This option limits those updates of data values that cause records to go off the view. The following instance tells this in more detail: Examp

Domains, Every simple attribute of an entity type have a possible set of va...

Every simple attribute of an entity type have a possible set of values that can be attached to it. This is known as the domain of an attribute. An attribute cannot have a value out

Data aggregation, Q.   Explain  data aggregatio n and discuss differen...

Q.   Explain  data aggregatio n and discuss different design constraints. Sol. Aggregation   One limitation of the E-R model is that it cannot express relationships amon

Write Your Message!

Captcha
Free Assignment Quote

Assured A++ Grade

Get guaranteed satisfaction & time on delivery in every assignment order you paid with us! We ensure premium quality solution document along with free turntin report!

All rights reserved! Copyrights ©2019-2020 ExpertsMind IT Educational Pvt Ltd