Create a subroutine, Database Management System

Assignment Help:

1. Create a subroutine that does the remote blast on the file protein.fa.

2. Pass that returned files from the blast to another subroutine that parses the output and sends it to an outfile. The returned values are the following: name, length, mismatches, and percent identity of the highest scoring hits.

3. You must demonstrate that you can set up an analysis pipeline using BioPerl, subroutines and Object Oriented Perl.

4. The file for processing is in Lecture10, protein.fa.


Related Discussions:- Create a subroutine

Prove that a relation which is 4nf must be bcnf, Prove that a relation whic...

Prove that a relation which is 4NF must be BCNF.   Ans Let R be in 4NF.  Suppose it is not in BCNF.  Hence, there exists an FD X→Y in R such that x is not a super key. Although

Compare wait-die deadlock prevention with wait-wound scheme, Compare wait-d...

Compare wait-die deadlock prevention scheme with wait-wound scheme   Ans:  Wait-Die Scheme  a) Based upon a nonpreemptive technique.  b) If Pi requests a resource present

What is object identity, What is object identity? An object retains its...

What is object identity? An object retains its identity even if some or all the values of variables or explanations of methods change overtime.

What is database files , The database files accept the actual data and ...

The database files accept the actual data and are typically the biggest in size. Depending on their shape, the tables for all the user operation can go in one database file-but

Object-based models - data models, Object-based Models: Use objects as key ...

Object-based Models: Use objects as key data representation components . Examples:-   Entity-Relationship Model: It is a collection of real world objects known as entitie

State the component diagram, State the Component Diagram A component d...

State the Component Diagram A component diagram represents a set of component and relationships among them. In a dynamic model, component diagram is used to model physical com

Illustrate the state model for the atm class, Illustrate the State model fo...

Illustrate the State model for the ATM class let us take state model for the ATM class given below in Figure showing state model of the ATM class and the pseudo code derived fr

Wound-wait scheme-deadlock prevention, " Wound-wait" scheme : It is based o...

" Wound-wait" scheme : It is based on a preemptive method. It is based on a simple rule:                   If Ti requests a database resource that is held by Tj

Differance between open addressing and chaining collision, Differance betwe...

Differance between Open addressing and chaining for collision resolution ? In open addressing , proceeding from the occupied position specified by hash address the program che

Write Your Message!

Captcha
Free Assignment Quote

Assured A++ Grade

Get guaranteed satisfaction & time on delivery in every assignment order you paid with us! We ensure premium quality solution document along with free turntin report!

All rights reserved! Copyrights ©2019-2020 ExpertsMind IT Educational Pvt Ltd