Create a subroutine, Database Management System

Assignment Help:

1. Create a subroutine that does the remote blast on the file protein.fa.

2. Pass that returned files from the blast to another subroutine that parses the output and sends it to an outfile. The returned values are the following: name, length, mismatches, and percent identity of the highest scoring hits.

3. You must demonstrate that you can set up an analysis pipeline using BioPerl, subroutines and Object Oriented Perl.

4. The file for processing is in Lecture10, protein.fa.


Related Discussions:- Create a subroutine

Query optimization in database system, Problem : AirwaysCentre, an inte...

Problem : AirwaysCentre, an international airline booking company currently uses a relational database system for their operations, which includes the following relations: P

Describe hashing in dbms, Describe Hashing in DBMS? Hashing: Hashing ...

Describe Hashing in DBMS? Hashing: Hashing is a technique to store data within an array so which storing, searching, inserting and deleting data is fast (in theory it's O(1))

Write a query that uses the union operator, Write a Query that uses the UNI...

Write a Query that uses the UNION Operator 1. Use the Software Experts database to:   a. Display the first and the last name of all consultants who worked on any projects f

Relationship sets, A relationship set is a set of relationships of the simi...

A relationship set is a set of relationships of the similar type. For example, let consider the relationship among two entities sets course and student. Collection of all the in

What is odbc, What is ODBC ? ODBC - Open DataBase Connectivity which i...

What is ODBC ? ODBC - Open DataBase Connectivity which is also denoted by ODBC enable the integration of SQL along with a common-purpose programming language. ODBC expose data

Differance between ddl and sdl, Differance between DDL and SDL? DDL and...

Differance between DDL and SDL? DDL and SDL - The data definition language (DDL) is used through DBA and database designers to describe internal schema, conceptual schema, and

Describe all integrity constraints which are violated, Consider the two rel...

Consider the two relations given below Given that A is the primary key of R, D is the primary key of S and there is a referential integrity among S.A and R.A, discuss all

Research in Concurency Control Protocols, Performance of Various Concurrenc...

Performance of Various Concurrency Control Mechanisms

Explain the three data anomalies, What are the three data anomalies that ar...

What are the three data anomalies that are similarly to take place as a result of data redundancy?  Can data redundancy be completely eliminated in database approach?  Why or why n

Define assertions in sql, Define Assertions in SQL a. An assertion is a...

Define Assertions in SQL a. An assertion is a predicate that is expressing a condition we wish the database to always satisfy.  b. Domain constraints, functional dependency

Write Your Message!

Captcha
Free Assignment Quote

Assured A++ Grade

Get guaranteed satisfaction & time on delivery in every assignment order you paid with us! We ensure premium quality solution document along with free turntin report!

All rights reserved! Copyrights ©2019-2020 ExpertsMind IT Educational Pvt Ltd