Create a subroutine, Database Management System

Assignment Help:

1. Create a subroutine that does the remote blast on the file protein.fa.

2. Pass that returned files from the blast to another subroutine that parses the output and sends it to an outfile. The returned values are the following: name, length, mismatches, and percent identity of the highest scoring hits.

3. You must demonstrate that you can set up an analysis pipeline using BioPerl, subroutines and Object Oriented Perl.

4. The file for processing is in Lecture10, protein.fa.


Related Discussions:- Create a subroutine

Explain the exec statement in sql, Explain the Exec statement in SQL An...

Explain the Exec statement in SQL Ans: Exec statement has the structure    EXEC SQL END-EXEC   Embeded SQl statements are of a form identical to non embedded SQL statem

Give example of relational schema, An instance of relational schema R (A, B...

An instance of relational schema R (A, B, C) has distinct values of A including NULL values. then A is a candidate key or not? If relational schema R (A, B, C) has distinct val

Can a filed occur in several field groups, Can a filed occur in several fie...

Can a filed occur in several field groups. Yes.  But it leads to redundant data redundancy.

Assignment, how does Btree differ from a B+ - tree?

how does Btree differ from a B+ - tree?

DISTIBUTED DATABASE, Define physical image of a global relation at a site

Define physical image of a global relation at a site

Explain the check clause, Explain the Check Clause The CHECK clause is ...

Explain the Check Clause The CHECK clause is employed to at the end of a CREATE TABLE statement specify table constraints. This is known as table-based constraint because it ap

Timestamp type, Do NOT use the timestamp type.  Use separate date and time ...

Do NOT use the timestamp type.  Use separate date and time data types only.  Figure out how to define an SQL insert statement that uses built-in SQL (or MySQL) functions to define

Define deadlock term, a. Define the term "deadlock". There are four conditi...

a. Define the term "deadlock". There are four conditions that must hold before deadlock is possible. Name them. b. Outline an algorithm that detects whether there is a deadlock.

What are multiple inheritances, What are multiple inheritances? Multipl...

What are multiple inheritances? Multiple inheritances allow a class to inherit variables and methods from many super classes.

aggregate functions-data manipulation language, Aggregate functions ...

Aggregate functions Some of these functions are min, count, max, and avg. These functions help in getting consolidated information from a set of tuples. Example:

Write Your Message!

Captcha
Free Assignment Quote

Assured A++ Grade

Get guaranteed satisfaction & time on delivery in every assignment order you paid with us! We ensure premium quality solution document along with free turntin report!

All rights reserved! Copyrights ©2019-2020 ExpertsMind IT Educational Pvt Ltd