Plot on a single graph the lennard-jones potential

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Computational Biophysics and Nanoscale Simulations:

1. Write down the formula of the Hamiltonian used in a typical classical atomistic Molecular dynamics simulation. Describe the potential energy terms using only one Simple sentence for each term.

2. Plot on a single graph the Lennard-Jones potential using the parameters σ =3, and ε1=2, ε2=3 and ε3=4. State in one short sentence what is the interpretation of the Parameter ε. Please remember to label your axes properly.

3. Plot on a single graph the Lennard-Jones potential using the parameters ε=3, σ1=2, σ2=3 and σ3=4. State in one short sentence what is the interpretation of the parameterσ. Please remember to label your axes properly.

Reference no: EM13317691

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