Needleman-wunsch algorithm

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Reference no: EM131156701

Using Perl or Python programming languages, implement the Needleman-Wunsch algorithm to find the optimal global alignment between two sequences. The program should ask the user to input the two sequences first, then to choose from a list of scoring matrixes (BLOSUM62, PAM250, etc.), and finally set values for gap penalties. The program should output the final alignment and its total score.

Reference no: EM131156701

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