Solution-How to create a cgi script that reads a fasta file

How to create a cgi script that reads a fasta file

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Reference no: EM132237969

How to create a CGI script that reads a FASTA file and displays a table with three columns:

1. The ID portion of the header

2. The length of the sequence

3. The rest of the header Should only shows 20 entries.

Should look like this

gi|170081572|ref|YP_001730892.1| 136 | flagellar protein FliS [Escherichia coli str. K-12 substr. DH10B]

gi|170080927|ref|YP_001730247.1| 1002 | transposase [Escherichia coli str. K-12 substr. DH10B]

gi|170083108|ref|YP_001732428.1| 195 | mannitol repressor protein [Escherichia coli str. K-12 substr. DH10B]

gi|170081288|ref|YP_001730608.1| 346 | putative oxidoreductase [Escherichia coli str. K-12 substr. DH10B]

The final result should be 3 column table

you can use biocode libraries for FASTA parsing

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Computer graphic script is used with the programming languages like this php,python and HTML the cgi script is basically used for providing the script needed to client end and the server end hence this can be used with any programming languages to provide client and server connection.

Reference no: EM132237969

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How to create a cgi script that reads a fasta file

Reference no: EM132237969

Reference no: EM132237969

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