Development of a metagenomics website

Assignment Help Web Project
Reference no: EM13816792

Project Name: Latrobe Glider Real time departure system

Project Description:

LTLT are currently in the process of delivering a student portal. The portal is a mobile first web app that provides students with a "one stop shop" for all the information they need to support their life at Latrobe.

One of the requirements, identified during consultations with students was the need for Latrobe specific public transport information. LTU runs a free campus bus at the Bundoora campus. The bus runs to a static timetable. With the advent of relatively cheap hardware for the burgeoning "Internet of Things" market it is now possible to create a real time departure time system. Data from this system could be exposed via the student portal.

The system would operate in this manner:

Bluetooth beacons will be installed at every bus stop. A low cost wi-fi / bluetooth device - perhaps Raspberry PI will be installed on the Glider bus. When the bus is in range of a stop the onboard device will read a stop id on the Bluetooth beacon at the stop. The device will then send the id and time via wi-fi network to a server which will take the data received and interpolate bus departure times for subsequent stops. The server will expose the interpolated departure times as a JSON file via a web service. The JSON data will be consumed by a widget in the student portal. Students will be able to look at the departure times on their phone.

This project will require a number of problems to be solved. E.g what to do in areas of no wifi coverage.Designing a website to manage a metagenomic database to facilitate undergraduate research.

We propose to establish an online metagenomic database and learning resource, using high throughput sequencing of environmental DNA, primarily for multi-disciplinary undergraduate teaching. Such a database asset will be valuable for a wide range of life and molecular science-based subjects. Subject coordinators will be able to use the database for teaching a number of bioinformatic techniques including functional gene annotation and the determination of community diversity and structure. As bioinformatic analysis is conducted in silico using online tools, course delivery and assessment can be efficiently completed online.

As part of this project we require the development of a Metagenomics Website and Learning Resource.

The website design can be divided into two distinct goals - the creation of a back-end to manage data and a front-end or user interface to facilitate student access to the data, completion of course work and submission of analyses.

Website - Data Management (Back-End)

Metagenomic sequencing produces a large amount of data, which necessitates an efficient system for storage, organization and distribution. The back-end of the website will interface with a storage database to retrieve sequence data for users ensuring that unique sequences are distributed and catalogued to the user accessing the system. The website will also store submitted user data to allow subject coordinators to access the data for further analysis (e.g. subjects linked downstream in the workflow). The creation of an efficient data management system will allow further datasets to be integrated into the website and broaden the number of subjects that can use the system.

Website - User Interface (Front-End)

Students will be able to login to the database and retrieve sequence data from the relevant dataset. In addition, students will find detailed information on the background to the metagenomic data, links to online analysis tools, tutorials and practice exercises to help them complete their analyses. Academic staff involved in this project will make content for the user interface.

Reference no: EM13816792

Questions Cloud

New haven initiative case : Please be thorough in your analysis and provide relative subject matter from this course in detailing how the external, environmental, and internal organizational factors impact the structure and design of the organization. Conclude your report with ..
Assignment on biotechnology applications : Biotechnology Applications
Research one contemporary case of trade restriction : Research one contemporary case of trade restriction, implemented by any nation. Research your topic, using at least 2 sources, and write a brief report (approximately 2 pages) on your findings.. Sources are documented properly. (MLA or APA style).
Effects of tariff and quota placed on imported automobiles : Explain the effects of a tariff and a quota placed on imported automobiles on a domestic market. Who is hurt with a tariff or a quota and why? Who benefits and why?
Development of a metagenomics website : The portal is a mobile first web app that provides students with a "one stop shop" for all the information they need to support their life at Latrobe.
Identify the infectious agent : Identify the infectious agent
Consumption possibilities and production possibilities : What is meant by the Consumption Possibilities of a country? How are Consumption Possibilities related to Production Possibilities in a closed economy? In an open economy?
Insurance today should be either public or insurance driven : Why do more than 45 million Americans not have Health Insurance? Argue whether or not you feel that Health Insurance today should be either Public or Insurance driven? Discuss with two other students your reasoning.
Trends in healthcare services : Trends in Healthcare Services

Reviews

Write a Review

Web Project Questions & Answers

  Evaluation at astro bank

Project planning as well as discussion under section ‘How do you keep team members?' on page 137 of the Lientz text, Information Technology Project Management. Identify and critically analyse the criteria the company should use in evaluating the s..

  Developing a system

I am interested in developing a system that will allow my customers to use the intelligent systems that are available online but keep my customers in my store for purchases. Part of helping with this will be gathering a list of the major golf web..

  Logo for advertisements in mobile apps or websites

Logos are all around us - from the products we purchase and the commercials on television, to advertisements in mobile apps or websites. For this discussion, you must upload or embed at least two (2) images of different logos

  Write, test and debug javascript for the problems

Write, test and debug (if necessary JavaScript for the problems that follow- When required to write a function, you must include a script to test the function with at least two different data set

  Web page authenticity and credibility

The birth of Internet has opened a new door for research. The World Wide Web gives endless amounts of data on just about anything you can think of.

  What are the prices of each

Research the Web for automatic speech recognition (ASR) systems. Make a list of the ones you find. What are the prices of each

  Study and critique an enterprise website

Create a website to present your results. You must critique a website that is different from the rest of the class

  Accurate and functional markup code

Demonstrate the following characteristics: Effective file management, Accurate and functional markup code and Effective and functional navigation

  Case study on usability of ipads and websites

The following report must be used for reference to complete this assignment. The Nielsen Norman Group published a report titled, "Usability of iPads and Websites." The report is a case study of the iPad usability

  Describe the web-based information technologies

Describe the Web-based information technologies (protocols, policies, tools) behind electronic health care medical records. Analyze the security requirements needed to protect the Web-based medical records, especially the requirement to be able to ..

  Discuss the apache web server

Discuss the Apache Web server in regard to cost, functionality, and compatibility. Are there certain implementations were it may not be suitable?

  What is the benefit of viewing source code on the web

What is the benefit of viewing source code on the Web. What is the purpose of the World Wide Web Consortium and what work does it perform

Free Assignment Quote

Assured A++ Grade

Get guaranteed satisfaction & time on delivery in every assignment order you paid with us! We ensure premium quality solution document along with free turntin report!

All rights reserved! Copyrights ©2019-2020 ExpertsMind IT Educational Pvt Ltd