Define process of finding the maximum cost path

Assignment Help Data Structure & Algorithms

Reference no: EM131876175

Question: 1. In the global sequence alignment, what is the impact of the gap penalty?

2. When performing an alignment of two A A sequences. Dayhoff' s or another scoring matrix is used. Suppose, a gap penalty is delta. Given a scoring matrix. D[21][21]. the dynamic programming is to find a path(s) with the largest score, s. Write the core of the dynamic programming forming the for loops that update the score s with respect to the A score matrix D. How is the process of finding the maximum cost path(s) in dynamic programming for the global alignment different from Dijkstra's shortest-path algorithm (pick node w with min cost P[w]; update costs of other nodes v by P[v] = min (P [v], P[w] + link_cos t(w. v)) (not including the difference between max and min)?

Reference no: EM131876175

Questions Cloud

Calculate the realized gain on the sale of stock : Calculate the realized gain on the sale of stock in 2017 that Whiteside should report - In 2016, Whiteside Catering purchased 60,000 shares of Roush Organic

What process of thought led to that sentence : What is a good theis statement that led to the topic on The Retail Industry. Discuss how you arrived at that one sentence.

Explain the task performed by the given pipeline : Explain the task performed by the following pipeline. Can you simplify it to use two commands instead of four? ls -t `grep fork *.c | cut -d: -f1 | sort -u`.

How much to invest in each alternative to maximize cash : Alexis Harrington received an inheritance of $95,000, and she is considering two speculative investments-the purchase of land and the purchase of cattle.

Define process of finding the maximum cost path : When performing an alignment of two A A sequences. Dayhoff' s or another scoring matrix is used. Suppose, a gap penalty is delta. Given a scoring matrix.

Do you anticipate any future problems for the shemer company : Do you anticipate any future problems for the Shemer Company? What do you need to do in order to verify your conjecture?

Compute the book value per share and earnings per share : Compute the Book value per share, Return on common stock equity and Earnings per share (ignore Avg for balance sheet accounts)

How do you locate all nonblank lines : How do you locate all nonblank lines that don't begin with #, /*, or //? Devise a sequence to locate those users who have logged in yesterday or earlier.

Describe the principal processes in the supply chain : Global food supply chains consist of many processes. Bananas, for example, are grown on farms in South or Central America.

User Account

All Pages